Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809321.1_cds_XP_016495684.1_9978
CDS Infomation

[gene=LOC107814750] [db_xref=GeneID:107814750] [protein=IRK-interacting protein-like] [protein_id=XP_016495684.1] [location=complement(join(56803..58152,59344..59365,59522..59622))] [gbkey=CDS]
Sequence

ATGAACAGCAGTGTAAAGTTCCCACATCTTCAGATACGGGACATATCAGGTGCCCTTCTC
TCGTTGTCTCGAGCTGAAGCTTTGACAAAGGAAGCCTTGGCAAAGCTGACGATTGGAGAG
CTGATGGATTCAAAAAATCGATCTGCTTTGAGTAAGAGTAGATTGGCTCGCACTTTGGCT
AAGGTTTTGCATATTCGAGCTGTGACAGGAGGAAATCGAAAGCCAAAATCCCAAGATAAG
TTCAAAAACGAAGCAGTAAAGAATGATGTGTTGAACAAAGGACAGCTCAATTCATTTGTA
GACAAAGATGAAAAACTGAAGAAGAGAGCAGCTACAGAAGCTTTTCTAGCCAACTTGTTT
GCGAGCATCTCAGCTGTTAAATCTGCATATGCTGAGTTGCAATTCGCTCAATCTCCATAT
GACCCCGAGTTTATTCAATCTGCTGATGAGGTGATCGTGTCCGAGCTGAAAAGTTTGTCC
GAATTGAAACATTGCTACTTAACGAAGCAATTTGATGAGTATTATTCCCTTGAGACAACT
CTGGTTTTAGCAGAAATTAAGGAGCAGAAAAGTATTTTGAAAACGTATTATATCATGGGA
AAGAAGTTGGATTCTCAACTTAAACTCATACTCTCAGAAATTACATTTCTCAGAGAGACA
CTAAATGAGGCCAATAAAGAGAACAAATTGCTTGAAAAGAGATTAATGAGGGAGCAAGTG
TCTGATCTTGACAATCTTCAGTTGACAAAATTAAGCCCCAGCCATTTTATTATGTTCCTT
CAGCAGACAATTAGGTCGATTCGGAGCTTTGTTATGTTGCTTTGTAGAGAGATGGAATAT
GCAGGGTGGGATTTAGATGCTGCAGCCTTGTCTATTCAACCTGGTATTATGTTCTTGAAA
TCAAGTGACAAATGTTATGCATTTGAATCATTTGTTTGCCGAGAGATGTTTGATGGTTTC
AATCATCCACAATTCTTAATCTCAAAGGAATCCACAACAGAGGAGAAGAAACAACAGAGG
TTATTTTTCAATAGATTCTTGAAACTGAGATCTGCTAATGTAGCAGATTACTTAGCCTGG
AAGCCTAAGTCAGCATTTGCACGGTTTTGTTGCGCGAAGTACTTGAAACTAGTTCATCCC
AAAATGGAAAGTTCTCTGTTTGGTGATTTGGATCATAGGAATTTACTAAGTTCTGGTGAG
TACCCGGACACAACTTTCTTTAGCACATTCGCGGAAATGGCAAAGCGCATTTGGCTGCTG
CAGTGTCTTGCCTTTTCTTTCGACCCGGAGGTTGCTATGTTTCAAGTGAGCAGTGAATGT
AGATTTTCTGATGTTTATATGGAGAGTGTGAATGAAGAAGCATTCTTGATGTCTTCCGGA
TCACCAGAAACCGAACCCCGTGTAGGATTCCCAATGGTTCCAGGGTTCATGGTTGGTAAA
ACTGTTATTCAATGTCAAGTTTATCTCTGTTGA

Peptide Sequence

PEP ID

XP_016495684.1
PEP Infomation

PREDICTED: IRK-interacting protein-like [Nicotiana tabacum]
Sequence

MNSSVKFPHLQIRDISGALLSLSRAEALTKEALAKLTIGELMDSKNRSALSKSRLARTLA
KVLHIRAVTGGNRKPKSQDKFKNEAVKNDVLNKGQLNSFVDKDEKLKKRAATEAFLANLF
ASISAVKSAYAELQFAQSPYDPEFIQSADEVIVSELKSLSELKHCYLTKQFDEYYSLETT
LVLAEIKEQKSILKTYYIMGKKLDSQLKLILSEITFLRETLNEANKENKLLEKRLMREQV
SDLDNLQLTKLSPSHFIMFLQQTIRSIRSFVMLLCREMEYAGWDLDAAALSIQPGIMFLK
SSDKCYAFESFVCREMFDGFNHPQFLISKESTTEEKKQQRLFFNRFLKLRSANVADYLAW
KPKSAFARFCCAKYLKLVHPKMESSLFGDLDHRNLLSSGEYPDTTFFSTFAEMAKRIWLL
QCLAFSFDPEVAMFQVSSECRFSDVYMESVNEEAFLMSSGSPETEPRVGFPMVPGFMVGK
TVIQCQVYLC

Transcript Sequence

Gene sequence data has not been registered.